Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
STAD rs12411017 chr1:227269867 T/C 0 406 14.27 14.23 1.48 KM Plot
STAD rs12417275 chr11:64143774 A/C 8.17E-7 397 14.23 15.92 6.83 KM Plot
STAD rs12677 chr1:197053373 G/A 5.24E-7 406 5.8 17.77 14.07 KM Plot
STAD rs12704087 chr7:148943168 T/C 5.13E-5 403 14.2 15.87 3.43 KM Plot
STAD rs12731209 chr1:196947139 C/T 7.1E-6 406 14.2 16.37 5.28 KM Plot
STAD rs13226967 chr7:148976898 A/T 4.29E-5 402 14.23 16.38 3.43 KM Plot
STAD rs13232863 chr7:148947051 T/C 5.0E-5 404 14.13 15.87 3.43 KM Plot
STAD rs13240280 chr7:148994613 C/G 3.81E-5 406 3.43 15.87 14.22 KM Plot
STAD rs13247642 chr7:148948647 C/T 5.0E-5 404 14.13 15.87 3.43 KM Plot
STAD rs13314520 chr3:118469241 A/G 1.13E-5 405 14.13 17.92 2.7 KM Plot
STAD rs13320696 chr3:118498673 G/T 1.11E-5 405 14.13 17.92 2.7 KM Plot
STAD rs1332663 chr1:197109042 C/T 1.2E-7 406 4.02 17.05 14.07 KM Plot
STAD rs1347359 chr17:28914529 T/C 1.66E-5 403 14.2 16.53 9.8 KM Plot
STAD rs140405296 chr10:86019863 ATT/A 1.1E-8 397 14.07 19.1 3.13 KM Plot
STAD rs140541723 chr1:227408077 T/A 0 405 14.27 14.23 1.48 KM Plot